Identification of chicken and C. elegans fibulin-1 homologs and characterization of the C. elegans fibulin-1 gene

Matrix Biol. 1998 Dec;17(8-9):635-46. doi: 10.1016/s0945-053x(98)90114-7.

Abstract

Fibulin-1, a member of the emerging family of fibulin proteins, is a component of elastic extracellular matrix fibers, basement membranes and blood. Homologs of fibulin-1 have been described in man, mouse and zebrafish. In this study, we describe the isolation and sequencing of chicken fibulin-1C and D cDNA variants. We also describe identification of a C. elegans cDNA encoding fibulin-1D and cosmids containing the C. elegans fibulin-1 gene. Using the cDNA, RT-PCR and computer-based analysis of genomic sequences, the exon/intron organization of the C. elegans fibulin-1 gene was determined. The C. elegans fibulin-1 gene is located on chromosome IV, is approximately 6 kb in length, contains 16 exons and encodes fibulin-1C and D variants. Comparative analysis of the deduced amino acid sequences of nematode and chicken fibulin-1 variants with other known vertebrate fibulin-1 polypeptides showed that the number and organization of structural modules are identical. The results of this study indicate that the structure of the fibulin-1 protein has remained highly conserved over a large period of evolution, suggestive of functional conservation.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Caenorhabditis elegans / genetics*
  • Calcium-Binding Proteins / genetics*
  • Chickens / genetics*
  • DNA, Complementary
  • Extracellular Matrix Proteins / genetics*
  • Genes, Helminth
  • Humans
  • Mice
  • Molecular Sequence Data
  • Sequence Analysis

Substances

  • Calcium-Binding Proteins
  • DNA, Complementary
  • Extracellular Matrix Proteins
  • fibulin

Associated data

  • GENBANK/AF051399
  • GENBANK/AF051400
  • GENBANK/AF051401
  • GENBANK/AF051402
  • GENBANK/AF051403
  • GENBANK/AF070477