The chromosome-associated protein is Drosophila TITIN. (A) Restriction map of the genomic region of the D-Titin gene. The genomic phage clones were either isolated directly (phage clone 5) using the LG genomic DNA expression clone as a probe, or were isolated using DNA flanking two nearby P-element insertions. Phage clones 1–4 and 6–8 were isolated with DNA flanking the v(3)ET1 and v(3)ET2 insertions, respectively. Three different D-Titin cDNA fragments were isolated from multiple independent screens of seven available cDNA libraries. The 5′ KZ cDNA was isolated from a 9–12 h embryonic cDNA library (Zinn et al., 1988). We infer that the KZ cDNA encodes an NH2 terminus based on the presence of a putative initiator methionine codon followed by an ORF encoding 882 AA. The ORF is flanked at the 5′ end by 389 nt of noncoding sequence. The NB cDNA was isolated from a 12–24 h embryonic cDNA library (Brown and Kafatos, 1988). Within the unprocessed NB cDNA, there is a 1-kb ORF flanked at its 5′ end by a 3′ splice acceptor site and at its 3′ end by a 5′ splice donor site (Mount, 1982; Mount et al., 1992). Several small (⩽312 nt) cDNAs were isolated from a 0–24 h embryonic cDNA library (Tamkun et al., 1991). The largest cDNA isolated from the Tamkum library is indicated as JT cDNA. Multiple unsuccessful attempts were made to connect the genomic DNA from phage clone 5 to the surrounding phage containing DNA from this region. Nonetheless, all of the genomic phage clones (1–7) and all of the cDNA clones colocalize to the same site on polytene chromosomes from wild-type larvae, cytological region 62C1-2. Furthermore, genomic phage clones 1–5 and all the D-Titin cDNAs map to an interval for which only a single complementation group has been identified, based on genomic Southern mapping and in situ hybridization to polytene chromosomes from larvae carrying local deficiencies. An asterisk indicates genomic fragments that revealed somatic and visceral muscle RNA accumulation in whole-mount embryos by in situ hybridization. (B) Protein sequence alignment among the corresponding ORFs from two D-Titin cDNAs (KZ and NB), chicken skeletal titin and human cardiac titin. Identities among all three proteins are indicated by an asterisk and conserved residues shared among all three proteins are indicated by period. (C) Sequence of the PEVK-rich ORF originally isolated with the scleroderma autoimmune serum (LG clone) and the sequence from the largest cDNA isolated from the Tamkun library (JT cDNA). 63% of the residues in the LG clone are either proline (P), glutamic acid (E), valine (V), or lysine (K). 56.4% of the residues encoded by the JT cDNA are either P, E, V, or K. The PEVK-rich domain of vertebrate titin, which provides muscle elasticity, is ∼70% P, E, V, K. These sequence data are available from GenBank/EMBL/DDJB under accession numbers AF045775, AF045776, AF045777, and AF045778.