Amino acid sequence alignment of CD36/LIMPII TSP-binding motifs with homologous sequences in HIV-1 gp120. Results of a pattern-based blast enhanced alignment utility search (BEAUTY) that matched a split motif in gp120 domains C2 (top) and C3 (bottom). *, indicates disulfide-bonded cysteine residues of the V3 loop. The brackets above alignments show boundaries of CD36 exon 5 coding region (CD36 aa 95–143). Amino acids identical between HIV-1 gp120 and either CD36 or LIMPII are highlighted white on black. Bold residues represent conservative substitutions according to the following groups: basic (KRH), acidic (DE), charged (KRH, DE), aromatic (YFW), hydroxy (STY), aliphatic (AG), nonpolar/branched (IVL), hydrophobic (AGP, IVL, FM), polar/hydrophilic (ST, KRH, DNEQ, CWY), X = any aa, period = gap. These sequence data are available from GenBank/EMBL/ DDBJ under accession numbers: huCD36, M24795; huLIMPII, D12676; HIV-1, partial sequence of isolate U37041. HIV-1 clade B consensus, MN, and LAI isolate sequences were retrieved from the WHO HIV Sequence Database.