GST-Ci binds wild-type wg promoter fragments more efficiently than mutagenized fragments. P, free DNA; C, GST-Ci/DNA complex. (A) Electrophoretic mobility shifts of wg promoter DNA fragment 1, containing Ci binding sites 1 and 2. Lanes 1–4, wild-type fragment 1. Lanes 5–8, mutagenized fragment 1. Lane 1, no GST-Ci; lanes 2–4, with GST-Ci and 0, 100, or 500 ng competing cold BS-1, respectively. (B) EMSA of wg promoter DNA fragment 2, containing Ci binding sites 3 and 4. Lanes 1–4, wild-type fragment 2. Lanes 5–8, mutagenized fragment 2. Lane 1, no GST-Ci; lanes 2–4, with GST-Ci and 0, 100, or 500 ng unlabeled BS-1 competitor, respectively; lane 5, no GST-Ci; lanes 6–8, with GST-Ci and 0, 100, or 500 ng unlabeled BS-1 competitor.