The structure of the gene for the second chain of the human interferon-gamma receptor

J Biol Chem. 1996 Nov 15;271(46):28947-52. doi: 10.1074/jbc.271.46.28947.

Abstract

The gene for the second chain of the human interferon-gamma receptor was analyzed from cosmid DNA clones. The gene spans over 33 kilobases of DNA and contains seven exons. The signal peptide is encoded by exons 1 and 2, the extracellular domain by exons 2, 3, 4, 5, and by part of 6. Exon 6 also encodes the whole transmembrane domain and part of the intracellular domain. Exon 7 encodes the remainder of the intracellular domain and contains the 3'-untranslated region. The sequences at the exon/intron boundaries are well conserved with respect to canonical acceptor/donor sites (AG/GT). The 5'-flanking region was sequenced and analyzed for transcription factor binding sites. No TATA or CAAT boxes in the promoter region were identified. Consistent with the lack of a TATA box, analysis of the mRNAs by primer extension showed multiple transcription start sites. Promoter activity of the 5'-flanking region was investigated with a luciferase reporter gene and the cytomegalovirus minimal promoter. Segments of the 5' region with promoter activity were identified.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Antigens, CD / genetics*
  • Base Sequence
  • DNA, Recombinant
  • Exons
  • Humans
  • Interferon gamma Receptor
  • Introns
  • Molecular Sequence Data
  • Promoter Regions, Genetic
  • Receptors, Interferon / genetics*
  • Sequence Deletion
  • Transcription, Genetic

Substances

  • Antigens, CD
  • DNA, Recombinant
  • Receptors, Interferon

Associated data

  • GENBANK/U68755