Nucleotide sequence of the capsid protein gene of papaya leaf-distortion mosaic potyvirus

Arch Virol. 1996;141(1):197-204. doi: 10.1007/BF01718601.

Abstract

The DNA complementary to the 3'-terminal 1 404 nucleotides [excluding the poly(A) tail] of papaya leaf-distortion mosaic potyvirus (PLDMV) RNA was cloned and sequenced. The sequence starts within a long open reading frame (ORF) of 1 195 nucleotides and is followed by a 3' non-coding region of 209 nucleotides. Capsid protein (CP) is encoded at the 3' terminus of the ORF. The CP contains 293 residues and has a Mr of 33 277. The CP of PLDMV exhibits 49 to 59% sequence similarity at the amino acid level to the CPs of papaya ringspot potyvirus (PRSV) and other potyviruses. This result is consistent with the absence of a serological relationship between PLDMV and PRSV or other potyviruses. The results support the assignment of PLDMV as a distinct member of the genus Potyvirus.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • Capsid / genetics*
  • Cloning, Molecular
  • Fruit / virology*
  • Genes, Viral*
  • Molecular Sequence Data
  • Open Reading Frames
  • Plant Leaves
  • Potyvirus / genetics*
  • Potyvirus / isolation & purification
  • Sequence Homology, Amino Acid

Associated data

  • GENBANK/D50082