Molecular analysis of the rolling-circle replicating plasmid pA1 of Lactobacillus plantarum A112

Appl Environ Microbiol. 1993 Jan;59(1):274-80. doi: 10.1128/aem.59.1.274-280.1993.

Abstract

Lactobacillus plantarum A112 has four different plasmids. Plus-origin-specific probes were used to determine that the smallest, cryptic plasmid, pA1 (2,820 bp), showed homology to the pE194 plasmid family. This subclass of plasmids uses the rolling-circle mode of replication. Subsequent analysis of plasmid pA1 demonstrated that it generates single-stranded DNA intermediates, and sequence analysis revealed that it contains three putative open reading frames (ORFs): ORF1, ORF2, and ORF3, which could encode proteins designated RepA (47 amino acids [aa]) and RepB (196 aa) and a protein of 103 aa, respectively. Two of these proteins, RepA (5.6 kDa) and RepB (26 kDa), were identified in in vitro transcription translation assays. The RepA protein contains a characteristic alpha-helix-turn-alpha-helix motif typical of DNA-binding proteins that act as DNA-binding repressors. The RepB protein shows a significant similarity with replication initiation proteins of the pE194 family of plasmids that use the rolling-circle mode of replication. Plasmid pA1 is able to replicate in Escherichia coli and Lactobacillus lactis subsp. lactis as well as in other L. plantarum strains.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Bacterial Proteins / analysis
  • Bacterial Proteins / genetics
  • Base Sequence
  • DNA Replication*
  • DNA, Bacterial / analysis*
  • DNA, Circular / analysis*
  • Escherichia coli / genetics
  • Lactobacillus / chemistry
  • Lactobacillus / genetics*
  • Molecular Sequence Data
  • Nucleic Acid Conformation
  • Peptides / genetics
  • Peptides / isolation & purification
  • Plasmids*
  • Sequence Analysis, DNA
  • Sequence Homology, Amino Acid

Substances

  • Bacterial Proteins
  • DNA, Bacterial
  • DNA, Circular
  • Peptides

Associated data

  • GENBANK/X62978
  • GENBANK/X62979
  • GENBANK/X62980
  • GENBANK/X62981
  • GENBANK/X62986
  • GENBANK/X62987
  • GENBANK/X62988
  • GENBANK/X62989
  • GENBANK/X62990
  • GENBANK/Z11717