Crystallization of a 67 kDa fragment of Escherichia coli DNA topoisomerase I

J Mol Biol. 1993 Aug 20;232(4):1213-6. doi: 10.1006/jmbi.1993.1474.

Abstract

Escherichia coli DNA topoisomerase I is a well-studied type I DNA topoisomerase that catalyzes the breakage and rejoining of one DNA strand to allow passage of the other strand. We have cloned and over-expressed a 67 kDa amino-terminal fragment of the protein, and shown that it retains the ability of the intact enzyme to cleave single-stranded DNA. High-quality crystals of the purified 67 kDa fragment have been obtained. The crystals belong to space group P2(1)2(1)2(1), with cell dimensions a = 64.0 A, b = 79.9 A and c = 142.3 A. They diffract to at least 2.8 A at low temperature and, when cooled to cryogenic temperatures, to at least 1.9 A in a synchrotron source. A complete native data set and two derivative data sets have been collected. A multiple isomorphous replacement map to 3 A resolution shows clear secondary structural elements. Final structure determination is in progress.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Crystallization
  • DNA Topoisomerases, Type I / chemistry*
  • Escherichia coli / enzymology*
  • Escherichia coli / genetics
  • Peptide Fragments / chemistry*
  • Recombinant Proteins / chemistry
  • X-Ray Diffraction

Substances

  • Peptide Fragments
  • Recombinant Proteins
  • DNA Topoisomerases, Type I