Cloning and sequences of the genes encoding the CfrBI restriction-modification system from Citrobacter freundii

Gene. 1993 Jul 15;129(1):77-81. doi: 10.1016/0378-1119(93)90698-3.

Abstract

The genes encoding the CfrBI restriction and modification (R-M) systems from Citrobacter freundii and recognizing the sequence 5'-CCWWGG-3' (W = A or T) were cloned in Escherichia coli McrBC- cells. The nucleotide (nt) sequences of the genes were determined. Two large open reading frames were found. Deletion analysis showed that one of them [1128 nt coding for 376 amino acids (aa)] corresponds to a methyltransferase (MTase)-encoding gene and the other (1065 nt coding for 355 aa) to a restriction endonuclease-encoding gene. The genes are oriented divergently and separated by 76 bp. A CfrBI site (5'-m4CCATGG) was found in the intergenic region of the cfrBIRM genes. Analysis of the deduced aa sequence of M.CfrBI made it possible to determine the typical features of a m4C-specific MTase. Limited homology between the M.CfrBI and R.CfrBI proteins was also found.

Publication types

  • Comparative Study

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • Citrobacter freundii / enzymology
  • Citrobacter freundii / genetics*
  • Cloning, Molecular
  • DNA Restriction-Modification Enzymes / chemistry
  • DNA Restriction-Modification Enzymes / genetics*
  • Genes, Bacterial*
  • Methylation
  • Molecular Sequence Data
  • Molecular Weight
  • Restriction Mapping
  • Sequence Alignment

Substances

  • DNA Restriction-Modification Enzymes

Associated data

  • GENBANK/D13146
  • GENBANK/L03653
  • GENBANK/L03654
  • GENBANK/L07632
  • GENBANK/L07947
  • GENBANK/M96931
  • GENBANK/M96932
  • GENBANK/M96933
  • GENBANK/X54209
  • GENBANK/X57945