Lariat structures are in vivo intermediates in yeast pre-mRNA splicing

Cell. 1984 Dec;39(3 Pt 2):611-21. doi: 10.1016/0092-8674(84)90468-9.

Abstract

Transcripts from an ADC1-actin gene fusion containing the yeast actin intron are efficiently spliced in vivo. Four distinct forms of the excised actin intron are found in poly(A)- RNA from yeast carrying this transcription unit on a multicopy plasmid. Two of them migrate abnormally slowly in polyacrylamide gels, and one of these contains a block to reverse transcription at the conserved UACUAAC sequence (TACTAAC box). We also detect a larger RNA in the poly(A)+ fraction with abnormal gel mobility and the same reverse transcriptase block. Analysis of the major species of excised actin intron, labeled with 32P in vivo, reveals the presence of a branch at the third A in the UACUAAC sequence. This A is linked via a 3'-5' phosphodiester bond to the downstream C, and via a 2'-5' phosphodiester bond to a G, presumably from the 5' end of the intron. Thus this intron RNA is in the form of a lariat.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Actins / genetics
  • Amino Acid Sequence
  • Base Sequence
  • DNA Restriction Enzymes
  • Genes
  • Genes, Fungal*
  • Molecular Weight
  • Nucleic Acid Hybridization
  • Nucleic Acid Precursors / genetics*
  • Plasmids
  • RNA Precursors
  • RNA Splicing*
  • RNA, Messenger / genetics*
  • Saccharomyces cerevisiae / genetics*
  • Transcription, Genetic*

Substances

  • Actins
  • Nucleic Acid Precursors
  • RNA Precursors
  • RNA, Messenger
  • DNA Restriction Enzymes

Associated data

  • GENBANK/J01310
  • GENBANK/L00026