Taxonomy-guided selection of Paraburkholderia busanensis sp. nov.: a versatile biocontrol agent with mycophagy against Colletotrichum scovillei causing pepper anthracnose

Microbiol Spectr. 2023 Dec 12;11(6):e0242623. doi: 10.1128/spectrum.02426-23. Epub 2023 Oct 20.

Abstract

Traditional control methods for postharvest diseases rely on fungicides, which cause human health and environmental concerns. This study introduces a taxonomy-guided strategy for selecting biocontrol agents. By focusing on Paraburkholderia group, which harbors diverse plant-beneficial strains, the inadvertent selection of harmful strains was circumvented, thereby obviating the need for laborious in vitro screening assays. A highly promising candidate, strain P39, has been identified, exhibiting remarkable biocontrol activity against Colletotrichum scovillei. Through comprehensive genomic, physiological, and biochemical analyses, P39 was characterized as a novel species within the Paraburkholderia genus and designated Paraburkholderia busanensis. Moreover, these findings deepen our understanding of bacterial-fungal interactions, as they elucidate a potential pathway for the utilization of fungal chitin, thereby enhancing our understanding of bacterial mycophagy. P. busanensis is a promising source of antifungal volatiles and putative novel secondary metabolites.

Keywords: Paraburkholderia; anthracnose; bacterial mycophagy; biocontrol.

MeSH terms

  • Antifungal Agents
  • Colletotrichum* / genetics
  • Food
  • Fungicides, Industrial*
  • Humans
  • Plant Diseases / microbiology
  • Plant Diseases / prevention & control

Substances

  • Fungicides, Industrial
  • Antifungal Agents

Supplementary concepts

  • Colletotrichum scovillei