Immune Transcriptome Study of Human Nucleated Erythroid Cells from Different Tissues by Single-Cell RNA-Sequencing

Cells. 2022 Nov 9;11(22):3537. doi: 10.3390/cells11223537.

Abstract

Nucleated erythroid cells (NECs) are the precursors of erythrocytes. They can be found in various hematopoietic tissues or in the blood. Recently, they have been shown to be active players in immunosuppression through the synthesis of arginase-2 and reactive oxygen species. In this work, we studied NECs in adult bone marrow, umbilical cord blood, and foetal liver parenchyma using single-cell RNA sequencing and found that: (1) all studied NECs expressed the same set of genes, which was enriched in "GO biological process" immunity-related terms; (2) early and late NECs had differential expression of the genes associated with immunosuppression, cell cycle progression, apoptosis, and glycolysis; (3) NECs from different tissues of origin had differential expression of the genes associated with immunosuppression.

Keywords: bone marrow; foetal liver; nucleated erythroid cells; red blood cells; scRNA-seq; single-cell RNA sequencing; umbilical cord blood.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Cell Count
  • Erythrocytes* / metabolism
  • Fetal Blood
  • Humans
  • RNA / genetics
  • RNA / metabolism
  • Transcriptome* / genetics

Substances

  • RNA

Grants and funding

This work was carried out with the support of the Russian Science Foundation, project number 21-15-00087 (https://rscf.ru/project/21-15-00087/, accessed on 1 October 2022).