Escherichia coli chemotaxis to competing stimuli in a microfluidic device with a constant gradient

Biotechnol Bioeng. 2022 Sep;119(9):2564-2573. doi: 10.1002/bit.28161. Epub 2022 Jun 30.

Abstract

In natural systems bacteria are exposed to many chemical stimulants; some attract chemotactic bacteria as they promote survival, while others repel bacteria because they inhibit survival. When faced with a mixture of chemoeffectors, it is not obvious which direction the population will migrate. Predicting this direction requires an understanding of how bacteria process information about their surroundings. We used a multiscale mathematical model to relate molecular level details of their two-component signaling system to the probability that an individual cell changes its swimming direction to the chemotactic velocity of a bacterial population. We used a microfluidic device designed to maintain a constant chemical gradient to compare model predictions to experimental observations. We obtained parameter values for the multiscale model of Escherichia coli chemotaxis to individual stimuli, α-methylaspartate and nickel ion, separately. Then without any additional fitting parameters, we predicted bacteria response to chemoeffector mixtures. Migration of E. coli toward α-methylaspartate was modulated by adding increasing concentrations of nickel ion. Thus, the migration direction was controlled by the relative concentrations of competing chemoeffectors in a predictable way. This study demonstrated the utility of a multiscale model to predict the migration direction of bacteria in the presence of competing chemoeffectors.

Keywords: bacterial chemotactic response; constant gradient chamber; microfluidic device; multiple stimuli; multiscale modeling; two-component signaling system.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Chemotaxis* / physiology
  • Escherichia coli / physiology
  • Lab-On-A-Chip Devices
  • Microfluidic Analytical Techniques*
  • Nickel

Substances

  • Nickel