Association of Vitamin D receptor gene polymorphisms and clinical/severe outcomes of COVID-19 patients

Infect Genet Evol. 2021 Dec:96:105098. doi: 10.1016/j.meegid.2021.105098. Epub 2021 Oct 2.

Abstract

Introduction: Growing evidence documented the critical impacts of vitamin D (VD) in the prognosis of COVID-19 patients. The functions of VD are dependent on the vitamin D receptor (VDR) in the VD/VDR signaling pathway. Therefore, we aimed to assess the association of VDR gene polymorphisms with COVID-19 outcomes.

Methods: In the present study, eight VDR single nucleotide polymorphisms (SNPs) were genotyped by polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) in 500 COVID-19 patients in Iran, including 160 asymptomatic, 250 mild/moderate, and 90 severe/critical cases. The association of these polymorphisms with severity, clinical outcomes, and comorbidities were evaluated through the calculation of the Odds ratio (OR).

Results: Interestingly, significant associations were disclosed for some of the SNP-related alleles and/or genotypes in one or more genetic models with different clinical data in COVID-19 patients. Significant association of VDR-SNPs with signs, symptoms, and comorbidities was as follows: ApaI with shortness of breath (P ˂ 0.001) and asthma (P = 0.034) in severe/critical patients (group III); BsmI with chronic renal disease (P = 0.010) in mild/moderate patients (group II); Tru9I with vomiting (P = 0.031), shortness of breath (P = 0.04), and hypertension (P = 0.030); FokI with fever and hypertension (P = 0.027) in severe/critical patients (group III); CDX2 with shortness of breath (P = 0.022), hypertension (P = 0.036), and diabetes (P = 0.042) in severe/critical patients (group III); EcoRV with diabetes (P ˂ 0.001 and P = 0.045 in mild/moderate patients (group II) and severe/critical patients (group III), respectively). However, the association of VDR TaqI and BglI polymorphisms with clinical symptoms and comorbidities in COVID-19 patients was not significant.

Conclusion: VDR gene polymorphisms might play critical roles in the vulnerability to infection and severity of COVID-19, probably by altering the risk of comorbidities. However, these results require further validation in larger studies with different ethnicities and geographical regions.

Keywords: COVID-19; Clinical outcomes; Genetic predisposition; Single nucleotide polymorphisms (SNPs); Vitamin D receptor.

Publication types

  • Multicenter Study

MeSH terms

  • Adult
  • Aged
  • COVID-19 / epidemiology
  • COVID-19 / etiology*
  • Comorbidity
  • Diabetes Mellitus / epidemiology
  • Female
  • Genes
  • Genetic Predisposition to Disease
  • Humans
  • Hypertension / epidemiology
  • Iran / epidemiology
  • Male
  • Middle Aged
  • Polymorphism, Restriction Fragment Length*
  • Polymorphism, Single Nucleotide*
  • Receptors, Calcitriol / genetics*
  • Renal Insufficiency, Chronic / epidemiology
  • Severity of Illness Index

Substances

  • Receptors, Calcitriol
  • VDR protein, human