Improved Specificity and Safety of Anti-Hepatitis B Virus TALENs Using Obligate Heterodimeric Fok I Nuclease Domains

Viruses. 2021 Jul 12;13(7):1344. doi: 10.3390/v13071344.

Abstract

Persistent hepatitis B virus (HBV) infection remains a serious medical problem worldwide, with an estimated global burden of 257 million carriers. Prophylactic and therapeutic interventions, in the form of a vaccine, immunomodulators, and nucleotide and nucleoside analogs, are available. Vaccination, however, offers no therapeutic benefit to chronic sufferers and has had a limited impact on infection rates. Although immunomodulators and nucleotide and nucleoside analogs have been licensed for treatment of chronic HBV, cure rates remain low. Transcription activator-like effector nucleases (TALENs) designed to bind and cleave viral DNA offer a novel therapeutic approach. Importantly, TALENs can target covalently closed circular DNA (cccDNA) directly with the potential of permanently disabling this important viral replicative intermediate. Potential off-target cleavage by engineered nucleases leading to toxicity presents a limitation of this technology. To address this, in the context of HBV gene therapy, existing TALENs targeting the viral core and surface open reading frames were modified with second- and third-generation FokI nuclease domains. As obligate heterodimers these TALENs prevent target cleavage as a result of FokI homodimerization. Second-generation obligate heterodimeric TALENs were as effective at silencing viral gene expression as first-generation counterparts and demonstrated an improved specificity in a mouse model of HBV replication.

Keywords: HBV; Sharkey; cccDNA; obligate heterodimeric TALENs.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Animals, Outbred Strains
  • Antiviral Agents / therapeutic use
  • Cell Line
  • DNA Viruses / genetics
  • DNA, Circular
  • DNA, Viral / genetics
  • Deoxyribonucleases, Type II Site-Specific / genetics
  • Deoxyribonucleases, Type II Site-Specific / metabolism
  • Disease Models, Animal
  • Endonucleases / genetics
  • Female
  • Genetic Therapy / methods
  • HEK293 Cells
  • Hep G2 Cells
  • Hepatitis B / drug therapy*
  • Hepatitis B / genetics
  • Hepatitis B / immunology
  • Hepatitis B virus / genetics*
  • Hepatitis B, Chronic / genetics
  • Hepatitis B, Chronic / virology
  • Humans
  • Mice
  • Transcription Activator-Like Effector Nucleases / genetics*
  • Transcription Activator-Like Effector Nucleases / therapeutic use
  • Virus Replication / genetics

Substances

  • Antiviral Agents
  • DNA, Circular
  • DNA, Viral
  • Endonucleases
  • Transcription Activator-Like Effector Nucleases
  • endodeoxyribonuclease FokI
  • Deoxyribonucleases, Type II Site-Specific