Reconciling Flux Experiments for Quantitative Modeling of Normal and Malignant Hematopoietic Stem/Progenitor Dynamics

Stem Cell Reports. 2021 Apr 13;16(4):741-753. doi: 10.1016/j.stemcr.2021.02.020. Epub 2021 Mar 25.

Abstract

Hematopoiesis serves as a paradigm for how homeostasis is maintained within hierarchically organized cell populations. However, important questions remain as to the contribution of hematopoietic stem cells (HSCs) toward maintaining steady state hematopoiesis. A number of in vivo lineage labeling and propagation studies have given rise to contradictory interpretations, leaving key properties of stem cell function unresolved. Using processed flow cytometry data coupled with a biology-driven modeling approach, we show that in vivo flux experiments that come from different laboratories can all be reconciled into a single unifying model, even though they had previously been interpreted as being contradictory. We infer from comparative analysis that different transgenic models display distinct labeling efficiencies across a heterogeneous HSC pool, which we validate by marker gene expression associated with HSC function. Finally, we show how the unified model of HSC differentiation can be used to simulate clonal expansion in the early stages of leukemogenesis.

Keywords: cell behaviour; cell dynamics; fate mapping; hematopoietic stem cells; kinetics; mathematical modeling; reconcile different published data.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Biomarkers / metabolism
  • Carcinogenesis / pathology
  • Cell Self Renewal
  • Guanine Nucleotide Exchange Factors / metabolism
  • Hematopoietic Stem Cells / metabolism*
  • Integrases / metabolism
  • Kinetics
  • Leukemia / pathology*
  • Mice, Transgenic
  • Models, Biological*
  • Receptor, TIE-2 / metabolism
  • Staining and Labeling

Substances

  • Biomarkers
  • FGD5 protein, mouse
  • Guanine Nucleotide Exchange Factors
  • Receptor, TIE-2
  • Cre recombinase
  • Integrases