Sec24C is an HIV-1 host dependency factor crucial for virus replication

Nat Microbiol. 2021 Apr;6(4):435-444. doi: 10.1038/s41564-021-00868-1. Epub 2021 Mar 1.

Abstract

Early events of the human immunodeficiency virus 1 (HIV-1) lifecycle, such as post-entry virus trafficking, uncoating and nuclear import, are poorly characterized because of limited understanding of virus-host interactions. Here, we used mass spectrometry-based proteomics to delineate cellular binding partners of curved HIV-1 capsid lattices and identified Sec24C as an HIV-1 host dependency factor. Gene deletion and complementation in Jurkat cells revealed that Sec24C facilitates infection and markedly enhances HIV-1 spreading infection. Downregulation of Sec24C in HeLa cells substantially reduced HIV-1 core stability and adversely affected reverse transcription, nuclear import and infectivity. Live-cell microscopy showed that Sec24C co-trafficked with HIV-1 cores in the cytoplasm during virus ingress. Biochemical assays demonstrated that Sec24C directly and specifically interacted with hexameric capsid lattices. A 2.3-Å resolution crystal structure of Sec24C228-242 in the complex with a capsid hexamer revealed that the Sec24C FG-motif bound to a pocket comprised of two adjoining capsid subunits. Combined with previous data1-4, our findings indicate that a capsid-binding FG-motif is conserved in unrelated proteins present in the cytoplasm (Sec24C), the nuclear pore (Nup153; refs. 3,4) and the nucleus (CPSF6; refs. 1,2). We propose that these virus-host interactions during HIV-1 trafficking across different cellular compartments are crucial for productive infection of target cells.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Active Transport, Cell Nucleus
  • Amino Acid Motifs
  • Binding Sites
  • Capsid / metabolism
  • Cell Nucleus / metabolism
  • Cytoplasm / metabolism
  • HIV-1 / metabolism
  • HIV-1 / physiology*
  • Host-Pathogen Interactions
  • Humans
  • Lentiviruses, Primate / metabolism
  • Lentiviruses, Primate / physiology
  • Nuclear Pore / metabolism
  • Protein Binding
  • Reverse Transcription
  • Structure-Activity Relationship
  • Vesicular Transport Proteins / chemistry
  • Vesicular Transport Proteins / genetics
  • Vesicular Transport Proteins / metabolism*
  • Virus Integration
  • Virus Replication*

Substances

  • SEC24C protein, human
  • Vesicular Transport Proteins