Complete chloroplast genome sequence of Bambusa subtruncata (Bambusodae)

Yangyang Zhang; Lili Fan; Dejin Xie; Muhammad Waqqas Khan Tarin; Jundong Rong; Tianyou He; Yushan Zheng

doi:10.1080/23802359.2020.1781577

Complete chloroplast genome sequence of Bambusa subtruncata (Bambusodae)

Mitochondrial DNA B Resour. 2020 Jun 26;5(3):2609-2610. doi: 10.1080/23802359.2020.1781577.

Authors

Yangyang Zhang¹, Lili Fan¹, Dejin Xie¹, Muhammad Waqqas Khan Tarin², Jundong Rong¹, Tianyou He², Yushan Zheng^{1

2}

Affiliations

¹ College of Forestry, Fujian Agriculture and Forestry University, Fuzhou, PR China.
² College of Arts & College of Landscape Architecture, Fujian Agriculture and Forestry University, Fuzhou, Fujian, PR China.

Abstract

Bambusa subtruncata is found in Xinyi county, Maoming city, Guangdong province, China. In the current study, we sequenced the complete chloroplast genome of B. subtruncata and reported for the first time. The genome was 139,444 bp in total length, including a large single-copy (LSC) region of 82,956 bp, a small single-copy (SSC) region of 12,897 bp, and a pair of invert repeats (IR) regions of 21,798 bp. Plastid genome comprised of 127 genes in total; 82 protein-coding genes, 37 tRNA genes, and eight rRNA genes. Phylogenetic analysis based on 25 chloroplast genomes indicates that B. subtruncata is closely related to Bambusa emeiensis in Bambusodae.

Keywords: Bambusa subtruncata; Bambusodae; phylogeny; plastid genome.

Grants and funding

This work was supported by Program for Scientific and Technological Innovation Team for Universities of Fujian Province (2018, No.49), Research Development Fund of Fujian Agriculture and Forestry University [KF2015085 and CXZX2017119], and Science and Technology Innovation and Development Fund Project of Fujian Agriculture and Forestry University (CXZX2017118).