Metal-organic framework (MOF) glasses have emerged as a new class of melt-quenched glasses; however, so far, all MOF glass production has remained at lab-scale; future applications will require large-scale, commercial production of parent crystalline MOFs. Yet, control of synthetic parameters, such as uniform temperature and mixing, can be challenging, particularly, when scaling-up production of a mixed-linker MOF or a zeolitic imidazolate framework (ZIF). Here, we examine the effect of heterogeneous linker distribution on the thermal properties and melting behavior of ZIF-62. X-ray diffraction (XRD), Raman, and 1H nuclear magnetic resonance spectroscopies revealed little discernable structural difference between samples of ZIF-62 synthesized in our lab and by a commercial supplier. Differential scanning calorimetry and variable temperature/isothermal XRD revealed the samples to have significantly different thermal behavior. Formation of ZIF-zni was identified, which contributed to a dramatic rise in the melting point by around 100 K and also led to the alteration of the macroscopic properties of the final glass. Parameters that might lead to the formation of unexpected phases such as an uneven distribution of linkers were identified, and characterization methods for the detection of unwanted phases are provided. Finally, the need for adequate consideration of linker distribution is stressed when characterizing mixed-linker ZIFs.