Synergistic mutations in soluble guanylyl cyclase (sGC) reveal a key role for interfacial regions in the sGC activation mechanism

J Biol Chem. 2019 Nov 29;294(48):18451-18464. doi: 10.1074/jbc.RA119.011010. Epub 2019 Oct 23.

Abstract

Soluble guanylyl cyclase (sGC) is the main receptor for nitric oxide (NO) and a central component of the NO-cGMP pathway, critical to cardiovascular function. NO binding to the N-terminal sensor domain in sGC enhances the cyclase activity of the C-terminal catalytic domain. Our understanding of the structural elements regulating this signaling cascade is limited, hindering structure-based drug design efforts that target sGC to improve the management of cardiovascular diseases. Conformational changes are thought to propagate the NO-binding signal throughout the entire sGC heterodimer, via its coiled-coil domain, to reorient the catalytic domain into an active conformation. To identify the structural elements involved in this signal transduction cascade, here we optimized a cGMP-based luciferase assay that reports on heterologous sGC activity in Escherichia coli and identified several mutations that activate sGC. These mutations resided in the dorsal flaps, dimer interface, and GTP-binding regions of the catalytic domain. Combinations of mutations from these different elements synergized, resulting in even greater activity and indicating a complex cross-talk among these regions. Molecular dynamics simulations further revealed conformational changes underlying the functional impact of these mutations. We propose that the interfacial residues play a central role in the sGC activation mechanism by coupling the coiled-coil domain to the active site via a series of hot spots. Our results provide new mechanistic insights not only into the molecular pathway for sGC activation but also for other members of the larger nucleotidyl cyclase family.

Keywords: activation; allosteric regulation; cyclic nucleotide; enzyme catalysis; enzyme mechanism; enzyme mutation; guanylate cyclase (guanylyl cyclase); luciferase assay; molecular dynamics; nitric oxide.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Catalytic Domain
  • Cyclic GMP / chemistry
  • Cyclic GMP / metabolism*
  • Enzyme Activation / genetics
  • Humans
  • Kinetics
  • Molecular Dynamics Simulation*
  • Mutation*
  • Nitric Oxide / chemistry
  • Nitric Oxide / metabolism*
  • Protein Binding
  • Protein Conformation
  • Protein Multimerization
  • Protein Subunits / chemistry
  • Protein Subunits / genetics
  • Protein Subunits / metabolism
  • Sequence Homology, Amino Acid
  • Signal Transduction
  • Soluble Guanylyl Cyclase / chemistry
  • Soluble Guanylyl Cyclase / genetics*
  • Soluble Guanylyl Cyclase / metabolism

Substances

  • Protein Subunits
  • Nitric Oxide
  • Soluble Guanylyl Cyclase
  • Cyclic GMP

Associated data

  • PDB/4NI2
  • PDB/5O5K
  • PDB/6JT2
  • PDB/6JT0