A Homeostatic Arid1a-Dependent Permissive Chromatin State Licenses Hepatocyte Responsiveness to Liver-Injury-Associated YAP Signaling

Cell Stem Cell. 2019 Jul 3;25(1):54-68.e5. doi: 10.1016/j.stem.2019.06.008.

Abstract

Following injury, differentiated epithelial cells can serve as a stem cell-independent source for tissue regeneration by undergoing reprogramming into other cell types. The intrinsic molecular basis underlying plasticity of differentiated cells remains largely unaddressed. Here we show that Arid1a, a key component of the SWI/SNF chromatin remodeling complex, controls liver regeneration and gene expression associated with emergence of injury-induced liver-progenitor-like cells (LPLCs). Hepatocyte-specific Arid1a ablation reduces LPLC gene expression in several models of periportal liver injury and impairs liver regeneration, leading to organ dysfunction. Arid1a establishes a permissive chromatin state at LPLC-enriched genes during homeostasis, suggesting it endows hepatocytes with competence to respond to injury-induced signals. Consistently, Arid1a facilitates binding of YAP, a critical regeneration signaling pathway, to LPLC-enriched genes, and Arid1a deletion prevents their YAP-associated induction following injury. Together, these findings provide a framework for studying the contributions of injury-induced LPLCs to periportal liver regeneration.

Keywords: Arid1a; Hippo/Yap; hepatocyte competence; liver regeneration; permissive chromatin.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acute Lung Injury / metabolism*
  • Adaptor Proteins, Signal Transducing / genetics
  • Adaptor Proteins, Signal Transducing / metabolism
  • Animals
  • Cell Cycle Proteins / genetics
  • Cell Cycle Proteins / metabolism
  • Cell Self Renewal
  • Chromatin / metabolism*
  • Chromatin Assembly and Disassembly
  • Clustered Regularly Interspaced Short Palindromic Repeats
  • DNA-Binding Proteins / metabolism*
  • Hepatocytes / physiology*
  • Homeostasis
  • Induced Pluripotent Stem Cells / physiology*
  • Liver Regeneration
  • Mice
  • Mice, Transgenic
  • Signal Transduction
  • Transcription Factors / metabolism*
  • YAP-Signaling Proteins

Substances

  • Adaptor Proteins, Signal Transducing
  • Arid1a protein, mouse
  • Cell Cycle Proteins
  • Chromatin
  • DNA-Binding Proteins
  • Transcription Factors
  • YAP-Signaling Proteins
  • Yap1 protein, mouse