Peptidoglycan glycosyltransferase-ligand binding assay based on tryptophan fluorescence quenching

Biochimie. 2018 Sep:152:1-5. doi: 10.1016/j.biochi.2018.06.010. Epub 2018 Jun 15.

Abstract

Peptidoglycan glycosyltransferases (GTase) of family 51 are essential enzymes for the synthesis of the glycan chains of the bacterial cell wall. They are considered potential antibacterial target, but discovery of inhibitors was hampered so far by the lack of efficient and affordable screening assay. Here we used Staphylococcus aureus MtgA to introduce a single tryptophan reporter residue in selected positions flanking the substrates binding cavity of the protein. We selected a mutant (Y181W) that shows strong fluorescence quenching in the presence of moenomycin A and two lipid II analogs inhibitors. The assay provides a simple method to study GTase-ligand interactions and can be used as primary high throughput screening of GTase inhibitors without the need for lipid II substrate or reporter ligands.

Keywords: Fluorescence assay; Glycosyltransferase; Lipid II; Moenomycin; Peptidoglycan.

MeSH terms

  • Bambermycins / metabolism
  • Circular Dichroism
  • Electrophoresis, Polyacrylamide Gel
  • Enzyme Inhibitors / pharmacology
  • High-Throughput Screening Assays*
  • Ligands
  • Mutagenesis, Site-Directed
  • Peptidoglycan Glycosyltransferase / antagonists & inhibitors
  • Peptidoglycan Glycosyltransferase / genetics
  • Peptidoglycan Glycosyltransferase / metabolism*
  • Protein Binding
  • Spectrometry, Fluorescence
  • Staphylococcus aureus / enzymology*
  • Substrate Specificity
  • Tryptophan / genetics
  • Tryptophan / metabolism*
  • Uridine Diphosphate N-Acetylmuramic Acid / analogs & derivatives
  • Uridine Diphosphate N-Acetylmuramic Acid / metabolism

Substances

  • Enzyme Inhibitors
  • Ligands
  • Uridine Diphosphate N-Acetylmuramic Acid
  • muramyl-NAc-(pentapeptide)pyrophosphoryl-undecaprenol
  • Bambermycins
  • moenomycin A
  • Tryptophan
  • Peptidoglycan Glycosyltransferase