Genetic Polymorphisms of 21 STR Loci in Hunan Province-based Han Population

Fa Yi Xue Za Zhi. 2016 Oct;32(5):356-362. doi: 10.3969/j.issn.1004-5619.2016.05.010. Epub 2016 Oct 25.

Abstract

Objectives: To investigate the genetic polymorphisms of 21 short tandem repeat (STR) loci (D3S1358, D13S317, D7S820, D16S539, Penta E, D2S441, TPOX, TH01, D2S1338, CSF1PO, Penta D, D10S1248, D19S433, vWA, D21S11, D18S51, D6S1043, D8S1179, D5S818, D12S391 and FGA).

Methods: A total of 560 blood samples were collected from unrelated healthy individuals of Han population in Hunan Province. Chelex-100 extraction method was applied to the extraction of genomic DNA, and an AGCU EX22 Kit and 9700 STR amplification was used in amplification reactions. The products were separated and analyzed on 310 Genetic Analyzer.

Results: A total of 248 alleles were observed, the allelic frequencies ranging from 0.001 to 0.518. Observation of genotype distributions for each locus showed no deviations from Hardy-Weinberg equilibrium except Penta EP=0.023). The combined power of discrimination, combined power of exclusion, and combined matching probability of the 21 STR loci were approximately 0.999 999 999 999 999 999 999 999 8, 0.999 999 998, and 1.36×10⁻²⁵, respectively.

Conclusions: The 21 STR loci show high polymorphisms in the Han population, which can provide valuable data and a theoretical basis for forensic individual identification and paternity testing.

Keywords: Han nationality; Hunan; forensic genetics; polymorphism, genetic; short tandem repeat sequences.

MeSH terms

  • Alleles
  • Asian People / genetics*
  • China
  • DNA Fingerprinting
  • Gene Frequency
  • Genetic Testing
  • Genetics, Population*
  • Genotype
  • Humans
  • Microsatellite Repeats*
  • Polymerase Chain Reaction
  • Polymorphism, Genetic*
  • Probability