Structure-based release analysis of the JC virus agnoprotein regions: A role for the hydrophilic surface of the major alpha helix domain in release

J Cell Physiol. 2018 Mar;233(3):2343-2359. doi: 10.1002/jcp.26106. Epub 2017 Aug 28.

Abstract

Agnoprotein (Agno) is an important regulatory protein of JC virus (JCV), BK virus (BKV) and simian virus 40 (SV40) and these viruses are unable to replicate efficiently in the absence of this protein. Recent 3D-NMR structural data revealed that Agno contains two alpha-helices (a minor and a major) while the rest of the protein adopts an unstructured conformation (Coric et al., 2017, J Cell Biochem). Previously, release of the JCV Agno from the Agno-positive cells was reported. Here, we have further mapped the regions of Agno responsible for its release by a structure-based systematic mutagenesis approach. Results revealed that amino acid residues (Lys22, Lys23, Phe31, Glu34, and Asp38) located either on or adjacent to the hydrophilic surface of the major alpha-helix domain of Agno play critical roles in release. Additionally, Agno was shown to strongly interact with unidentified components of the cell surface when cells are treated with Agno, suggesting additional novel roles for Agno during the viral infection cycle.

Keywords: BKV; DNA replication; JCV; Merkel cell polyomavirus; SV40; agnoprotein; alpha helix; dimer/oligomer formation; polyomaviruses; progressive multifocal leukoencephalopathy, viroporin; transcription protein release.

MeSH terms

  • HEK293 Cells
  • Humans
  • Hydrophobic and Hydrophilic Interactions
  • JC Virus / genetics
  • JC Virus / growth & development
  • JC Virus / metabolism*
  • Models, Molecular
  • Protein Binding
  • Protein Conformation, alpha-Helical
  • Sequence Deletion
  • Structure-Activity Relationship
  • Surface Properties
  • Transfection
  • Viral Regulatory and Accessory Proteins / chemistry
  • Viral Regulatory and Accessory Proteins / genetics
  • Viral Regulatory and Accessory Proteins / metabolism*
  • Virus Replication*

Substances

  • Viral Regulatory and Accessory Proteins
  • agnoprotein, polyomavirus