Pyrano[2,3,4- cd]indole as a Scaffold for Selective Nonbasic 5-HT6R Ligands

ACS Med Chem Lett. 2017 Mar 27;8(4):390-394. doi: 10.1021/acsmedchemlett.6b00482. eCollection 2017 Apr 13.

Abstract

In this letter, we report the synthesis of a pyrano[2,3,4-cd]indole chemical scaffold designed through a tandem bioisostere generation/virtual screening protocol in search of 5-HT6R ligands. The discovered chemical scaffold resulted in the design of highly active basic and nonbasic 5-HT6R ligands (5-HT6R Ki = 1 nM for basic compound 6b and 5-HT6R Ki = 4 nM for its neutral analog 7b). Additionally, molecular modeling suggested that the hydroxyl group of nonbasic ligands 7a-7d forms hydrogen bonds with aspartic acid D3×32 or D7.36×35.

Keywords: 5-HT6; Serotonin; bioisosteres; molecular modeling; nonbasic; virtual screening.