RAG1/2 induces genomic insertions by mobilizing DNA into RAG1/2-independent breaks

J Exp Med. 2017 Mar 6;214(3):815-831. doi: 10.1084/jem.20161638. Epub 2017 Feb 8.

Abstract

The RAG recombinase (RAG1/2) plays an essential role in adaptive immunity by mediating V(D)J recombination in developing lymphocytes. In contrast, aberrant RAG1/2 activity promotes lymphocyte malignancies by causing chromosomal translocations and DNA deletions at cancer genes. RAG1/2 can also induce genomic DNA insertions by transposition and trans-V(D)J recombination, but only few such putative events have been documented in vivo. We used next-generation sequencing techniques to examine chromosomal rearrangements in primary murine B cells and discovered that RAG1/2 causes aberrant insertions by releasing cleaved antibody gene fragments that subsequently reintegrate into DNA breaks induced on a heterologous chromosome. We confirmed that RAG1/2 also mobilizes genomic DNA into independent physiological breaks by identifying similar insertions in human lymphoma and leukemia. Our findings reveal a novel RAG1/2-mediated insertion pathway distinct from DNA transposition and trans-V(D)J recombination that destabilizes the genome and shares features with reported oncogenic DNA insertions.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, N.I.H., Extramural

MeSH terms

  • Animals
  • B-Lymphocytes / metabolism
  • DNA Damage*
  • DNA-Binding Proteins / physiology*
  • Genomic Instability
  • Homeodomain Proteins / physiology*
  • Immunoglobulins / genetics
  • Mice
  • Mice, Inbred C57BL
  • Mutagenesis, Insertional*
  • Receptors, Antigen, T-Cell / genetics
  • Translocation, Genetic
  • V(D)J Recombination

Substances

  • DNA-Binding Proteins
  • Homeodomain Proteins
  • IgK
  • Immunoglobulins
  • Rag2 protein, mouse
  • Receptors, Antigen, T-Cell
  • RAG-1 protein