-Omic and Electronic Health Record Big Data Analytics for Precision Medicine

IEEE Trans Biomed Eng. 2017 Feb;64(2):263-273. doi: 10.1109/TBME.2016.2573285. Epub 2016 Oct 10.

Abstract

Objective: Rapid advances of high-throughput technologies and wide adoption of electronic health records (EHRs) have led to fast accumulation of -omic and EHR data. These voluminous complex data contain abundant information for precision medicine, and big data analytics can extract such knowledge to improve the quality of healthcare.

Methods: In this paper, we present -omic and EHR data characteristics, associated challenges, and data analytics including data preprocessing, mining, and modeling.

Results: To demonstrate how big data analytics enables precision medicine, we provide two case studies, including identifying disease biomarkers from multi-omic data and incorporating -omic information into EHR.

Conclusion: Big data analytics is able to address -omic and EHR data challenges for paradigm shift toward precision medicine.

Significance: Big data analytics makes sense of -omic and EHR data to improve healthcare outcome. It has long lasting societal impact.

Publication types

  • Review
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.
  • Research Support, N.I.H., Extramural

MeSH terms

  • Databases, Factual*
  • Electronic Health Records*
  • Genomics*
  • Humans
  • Medical Informatics*
  • Precision Medicine*