-
Fast and sensitive multiple sequence alignments on a microcomputer.
Department of Genetics, Trinity College, Dublin, Ireland.
A strategy is described for the rapid alignment of many long nucleic acid or protein sequences on a microcomputer. The program described can handle up to 100 sequences of 1200 residues each. The approach is based on progressively aligning sequences according to the branching order in an initial phylogenetic tree. The results obtained using the package appear to be as sensitive as those from any other available method.
PMID: 2720464 [PubMed - indexed for MEDLINE]
-
Cited by over 100 PubMed Central articles
-
Molecular epidemiology of eastern equine encephalitis virus, New York.
Young DS, Kramer LD, Maffei JG, Dusek RJ, Backenson PB, Mores CN, Bernard KA, Ebel GD.
Emerg Infect Dis. 2008 Mar; 14(3):454-60.
[Emerg Infect Dis. 2008]
-
Development of a species-specific fur gene-based method for identification of the Burkholderia cepacia complex.
Lynch KH, Dennis JJ.
J Clin Microbiol. 2008 Feb; 46(2):447-55. Epub 2007 Dec 5.
[J Clin Microbiol. 2008]
-
Impact of salinomycin on the intestinal microflora of broiler chickens.
Johansen CH, Bjerrum L, Pedersen K.
Acta Vet Scand. 2007 Oct 26; 49:30. Epub 2007 Oct 26.
[Acta Vet Scand. 2007]
- » See all...