Photobacterium sanguinicancri sp. nov. isolated from marine animals

Antonie Van Leeuwenhoek. 2016 Jun;109(6):817-25. doi: 10.1007/s10482-016-0681-x. Epub 2016 Apr 5.

Abstract

Six strains were isolated from the hemolymph of the spider crab Maja brachydactyla, captured in Spain, and one from a diseased blue mussel, Mytilus edulis. The 16S rRNA gene sequences showed close similarity to the recently described Photobacterium swingsii (98.1 %) and to a lesser degree to Photobacterium aquimaris (97.8 %). MLSA analyses showed a monophyletic group including P. swingsii that form a new subclade. All genomic analyses (Average Nucleotide Identity, Average Amino Acid Identity, and in silico DNA-DNA) clearly separate the strains analysed from P. swingsii with values below the thresholds to delimit a new species. The phenotypic, genotypic and genomic data presented here clearly place these strains as a coherent group within the genus Photobacterium, for which we propose the name Photobacterium sanguinicancri sp. nov. Strain CAIM 1827(T) (=CECT 7579(T), =DSM 24670(T)) is proposed as the type strain of the species.

Keywords: Bacteria; Genome; Photobacterium; Vibrionaceae.

MeSH terms

  • Amino Acids / metabolism
  • Animals
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism
  • Bacterial Typing Techniques
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / genetics
  • Decapoda / microbiology*
  • Fatty Acids / metabolism
  • Genotype
  • Phenotype
  • Photobacterium / classification*
  • Photobacterium / genetics
  • Photobacterium / isolation & purification*
  • Photobacterium / metabolism
  • Phylogeny
  • RNA, Ribosomal, 16S / genetics
  • Seawater / microbiology
  • Sequence Analysis, DNA
  • Sodium Chloride / metabolism
  • Spain

Substances

  • Amino Acids
  • Bacterial Proteins
  • DNA, Bacterial
  • DNA, Ribosomal
  • Fatty Acids
  • RNA, Ribosomal, 16S
  • Sodium Chloride