In conventional microscopy, specimens lying within the depth of field are clearly recorded whereas other parts are blurry. Although digital holographic microscopy allows post-processing on holograms to reconstruct multifocus images, it suffers from defocus noise as a traditional microscope in numerical reconstruction. In this paper, we demonstrate a method that can achieve extended focused imaging (EFI) and reconstruct a depth map (DM) of three-dimensional (3D) objects. We first use a depth-from-focus algorithm to create a DM for each pixel based on entropy minimization. Then we show how to achieve EFI of the whole 3D scene computationally. Simulation and experimental results involving objects with multiple axial sections are presented to validate the proposed approach.