High resolution melting analysis of the NR1I3 genetic variants: Is there an association with neonatal hyperbilirubinemia?

Gene. 2015 Dec 1;573(2):198-204. doi: 10.1016/j.gene.2015.07.045. Epub 2015 Jul 16.

Abstract

Constitutive androstane receptor (CAR) encoded by the nuclear receptor subfamily 1, group I, member 3 (NR1I3) gene regulates the elimination of bilirubin through activating the components of the bilirubin clearance pathway. Hence, NR1I3 genetic variants may affect bilirubin metabolism and result in neonatal hyperbilirubinemia. Thus far, research which investigates the association between NR1I3 variants and neonatal hyperbilirubinemia has not been undertaken in any population. The present study aimed to evaluate the influence of MPJ6_1I3008 (rs10157822), IVS8+116T>G (rs4073054) and 540A>G (rs2307424) on neonatal hyperbilirubinemia development in the Malay population. Buccal swabs were collected from 232 hyperbilirubinemia and 277 control term newborns with gestational age ≥37weeks and birth weight ≥2500g. The NR1I3 variants were genotyped by using high resolution melting (HRM) assays and verified by DNA sequencing. Gender, mode of delivery and birth weight did not differ between hyperbilirubinemia and control groups. The genotypic and allelic frequencies of MPJ6_1I3008, IVS8+116T>G and 540A>G were not significantly different between the groups. However, stratification by gender revealed a significant inverse association between homozygous variant genotype of MPJ6_1I3008 and risk of neonatal hyperbilirubinemia in the females (OR, 0.44; 95% CI, 0.20-0.95; p=0.034). This study demonstrates that the homozygous variant genotype of MPJ6_1I3008 was associated with a significant reduced risk of neonatal hyperbilirubinemia in the females.

Keywords: Buccal; Constitutive androstane receptor; High resolution melting; Hyperbilirubinemia; Malay; Neonatal jaundice.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • Case-Control Studies
  • Constitutive Androstane Receptor
  • Cross-Sectional Studies
  • Female
  • Genetic Association Studies
  • Genetic Predisposition to Disease
  • Genotyping Techniques
  • Haplotypes
  • Humans
  • Hyperbilirubinemia, Neonatal / genetics*
  • Infant, Newborn
  • Male
  • Protective Factors
  • Receptors, Cytoplasmic and Nuclear / genetics*
  • Sex Characteristics
  • Transition Temperature

Substances

  • Constitutive Androstane Receptor
  • NR1I3 protein, human
  • Receptors, Cytoplasmic and Nuclear