Structural and biochemical analysis of the essential diadenylate cyclase CdaA from Listeria monocytogenes

J Biol Chem. 2015 Mar 6;290(10):6596-606. doi: 10.1074/jbc.M114.630418. Epub 2015 Jan 20.

Abstract

The recently identified second messenger cyclic di-AMP (c-di-AMP) is involved in several important cellular processes, such as cell wall metabolism, maintenance of DNA integrity, ion transport, transcription regulation, and allosteric regulation of enzyme function. Interestingly, c-di-AMP is essential for growth of the Gram-positive model bacterium Bacillus subtilis. Although the genome of B. subtilis encodes three c-di-AMP-producing diadenlyate cyclases that can functionally replace each other, the phylogenetically related human pathogens like Listeria monocytogenes and Staphylococcus aureus possess only one enzyme, the diadenlyate cyclase CdaA. Because CdaA is also essential for growth of these bacteria, the enzyme is a promising target for the development of novel antibiotics. Here we present the first crystal structure of the L. monocytogenes CdaA diadenylate cyclase domain that is conserved in many human pathogens. Moreover, biochemical characterization of the cyclase revealed an unusual metal cofactor requirement.

Keywords: Bacterial Signal Transduction; Crystal Structure; Cyclic Diadenosine Monophosphate (c-di-AMP); Enzyme Catalysis; Second Messenger.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Bacillus subtilis / chemistry
  • Bacterial Proteins / chemistry*
  • Catalysis
  • Cell Wall / chemistry
  • Cobalt / chemistry
  • Crystallography, X-Ray*
  • Dinucleoside Phosphates / metabolism
  • Humans
  • Listeria monocytogenes / enzymology*
  • Phosphorus-Oxygen Lyases / chemistry*
  • Phosphorus-Oxygen Lyases / genetics
  • Phosphorus-Oxygen Lyases / metabolism
  • Protein Conformation

Substances

  • Bacterial Proteins
  • Dinucleoside Phosphates
  • cyclic diadenosine phosphate
  • Cobalt
  • Phosphorus-Oxygen Lyases
  • diadenylate cyclase, Bacillus subtilis

Associated data

  • PDB/2FB5
  • PDB/3C1Y
  • PDB/3C1Z
  • PDB/3C21
  • PDB/3C23
  • PDB/4RV7