The tap-tpg gene pair on the linear plasmid functions to maintain a linear topology of the chromosome in Streptomyces rochei

Mol Microbiol. 2015 Mar;95(5):846-58. doi: 10.1111/mmi.12904. Epub 2015 Jan 24.

Abstract

Streptomyces rochei 7434AN4 carries three linear plasmids, pSLA2-L (211 kb), pSLA2-M (113 kb) and pSLA2-S (18 kb), their complete nucleotide sequences having been determined. Restriction and sequencing analysis revealed that the telomere sequences at both ends of the linear chromosome are identical to each other, are 98.5% identical to the right end sequences of pSLA2-L and pSLA2-M up to 3.1 kb from the ends and have homology to those of typical Streptomyces species. Mutant 2-39, which lost all the three linear plasmids, was found to carry a circularized chromosome. Sequence comparison of the fusion junction and both deletion ends revealed that chromosomal circularization occurred by terminal deletions followed by nonhomologous recombination. Curing of pSLA2-L from strain 51252, which carries only pSLA2-L, also resulted in terminal deletions in newly obtained mutants. The tap-tpg gene pair, which encodes a telomere-associated protein and a terminal protein for end patching, is located on pSLA2-L and pSLA2-M but has not hitherto been found on the chromosome. These results led us to the idea that the tap-tpg of pSLA2-L or pSLA2-M functions to maintain a linear chromosome in strain 7434AN4. This hypothesis was finally confirmed by complementation and curing experiments of the tap-tpg of pSLA2-M.

MeSH terms

  • Amino Acid Sequence
  • Chromosomes, Bacterial / genetics*
  • Chromosomes, Bacterial / ultrastructure*
  • DNA Replication
  • DNA, Bacterial / metabolism*
  • Molecular Sequence Data
  • Mutation
  • Plasmids / genetics*
  • Recombination, Genetic
  • Restriction Mapping
  • Sequence Alignment
  • Sequence Analysis, DNA
  • Streptomyces / genetics*
  • Telomere / genetics

Substances

  • DNA, Bacterial

Associated data

  • GENBANK/AB088224
  • GENBANK/AB597522
  • GENBANK/AB905437
  • GENBANK/AB905438
  • GENBANK/AB905441
  • GENBANK/AB907705
  • GENBANK/IFO13350