The biosynthesis of UDP-d-FucNAc-4N-(2)-oxoglutarate (UDP-Yelosamine) in Bacillus cereus ATCC 14579: Pat and Pyl, an aminotransferase and an ATP-dependent Grasp protein that ligates 2-oxoglutarate to UDP-4-amino-sugars

J Biol Chem. 2014 Dec 19;289(51):35620-32. doi: 10.1074/jbc.M114.614917. Epub 2014 Nov 3.

Abstract

Surface glycan switching is often observed when micro-organisms transition between different biotic and abiotic niches, including biofilms, although the advantages of this switching to the organism are not well understood. Bacillus cereus grown in a biofilm-inducing medium has been shown to synthesize an unusual cell wall polysaccharide composed of the repeating subunit →6)Gal(α1-2)(2-R-hydroxyglutar-5-ylamido)Fuc2NAc4N(α1-6)GlcNAc(β1→, where galactose is linked to the hydroxyglutarate moiety of FucNAc-4-amido-(2)-hydroxyglutarate. The molecular mechanism involved in attaching 2-hydroxyglutarate to 4-amino-FucNAc has not been determined. Here, we show two genes in B. cereus ATCC 14579 encoding enzymes involved in the synthesis of UDP-FucNAc-4-amido-(2)-oxoglutarate (UDP-Yelosamine), a modified UDP-sugar not previously reported to exist. Using mass spectrometry and real time NMR spectroscopy, we show that Bc5273 encodes a C4″-aminotransferase (herein referred to as Pat) that, in the presence of pyridoxal phosphate, transfers the primary amino group of l-Glu to C-4″ of UDP-4-keto-6-deoxy-d-GlcNAc to form UDP-4-amino-FucNAc and 2-oxoglutarate. Pat also converts 4-keto-xylose, 4-keto-glucose, and 4-keto-2-acetamido-altrose to their corresponding UDP-4-amino-sugars. Bc5272 encodes a carboxylate-amine ligase (herein referred as Pyl) that, in the presence of ATP and Mg(II), adds 2-oxoglutarate to the 4-amino moiety of UDP-4-amino-FucNAc to form UDP-Yelosamine and ADP. Pyl is also able to ligate 2-oxoglutarate to other 4-amino-sugar derivatives to form UDP-Yelose, UDP-Solosamine, and UDP-Aravonose. Characterizing the metabolic pathways involved in the formation of modified nucleotide sugars provides a basis for understanding some of the mechanisms used by bacteria to modify or alter their cell surface polysaccharides in response to changing growth and environmental challenges.

Keywords: Bacterial Metabolism; Biofilm; Carbohydrate Biosynthesis; Enzyme Catalysis; Glycobiology.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Bacillus cereus / genetics
  • Bacillus cereus / metabolism*
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism*
  • Carbamoyl-Phosphate Synthase (Ammonia) / genetics
  • Carbamoyl-Phosphate Synthase (Ammonia) / metabolism*
  • Carbohydrate Sequence
  • Chromatography, High Pressure Liquid / methods
  • Electrophoresis, Polyacrylamide Gel
  • Escherichia coli / genetics
  • Hydrogen-Ion Concentration
  • Kinetics
  • Mass Spectrometry / methods
  • Molecular Sequence Data
  • Proton Magnetic Resonance Spectroscopy
  • Recombinant Proteins / metabolism
  • Substrate Specificity
  • Transaminases / genetics
  • Transaminases / metabolism*
  • Uridine Diphosphate Sugars / biosynthesis*

Substances

  • Bacterial Proteins
  • Recombinant Proteins
  • Uridine Diphosphate Sugars
  • Transaminases
  • Carbamoyl-Phosphate Synthase (Ammonia)

Associated data

  • GENBANK/KM486797
  • GENBANK/KM486798