Multiple frequency audio signal communication as a mechanism for neurophysiology and video data synchronization

J Neurosci Methods. 2014 Dec 30:238:35-42. doi: 10.1016/j.jneumeth.2014.09.018. Epub 2014 Sep 26.

Abstract

Background: Current methods for aligning neurophysiology and video data are either prepackaged, requiring the additional purchase of a software suite, or use a blinking LED with a stationary pulse-width and frequency. These methods lack significant user interface for adaptation, are expensive, or risk a misalignment of the two data streams.

New method: A cost-effective means to obtain high-precision alignment of behavioral and neurophysiological data is obtained by generating an audio-pulse embedded with two domains of information, a low-frequency binary-counting signal and a high, randomly changing frequency. This enabled the derivation of temporal information while maintaining enough entropy in the system for algorithmic alignment.

Results: The sample to frame index constructed using the audio input correlation method described in this paper enables video and data acquisition to be aligned at a sub-frame level of precision.

Comparisons with existing method: Traditionally, a synchrony pulse is recorded on-screen via a flashing diode. The higher sampling rate of the audio input of the camcorder enables the timing of an event to be detected with greater precision.

Conclusions: While on-line analysis and synchronization using specialized equipment may be the ideal situation in some cases, the method presented in the current paper presents a viable, low cost alternative, and gives the flexibility to interface with custom off-line analysis tools. Moreover, the ease of constructing and implements this set-up presented in the current paper makes it applicable to a wide variety of applications that require video recording.

Keywords: Alignment; Behavior; Brain; In vivo recording; Microcontroller.

Publication types

  • Evaluation Study
  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acoustic Stimulation / instrumentation
  • Acoustic Stimulation / methods*
  • Algorithms
  • Animals
  • Brain / physiology
  • Equipment Design
  • Motor Activity / physiology
  • Neurophysiology / instrumentation
  • Neurophysiology / methods*
  • Software
  • Temperature
  • Time Factors
  • Video Recording / instrumentation
  • Video Recording / methods*