Studies on deacetoxycephalosporin C synthase support a consensus mechanism for 2-oxoglutarate dependent oxygenases

Biochemistry. 2014 Apr 22;53(15):2483-93. doi: 10.1021/bi500086p. Epub 2014 Apr 11.

Abstract

Deacetoxycephalosporin C synthase (DAOCS) catalyzes the oxidative ring expansion of penicillin N (penN) to give deacetoxycephalosporin C (DAOC), which is the committed step in the biosynthesis of the clinically important cephalosporin antibiotics. DAOCS belongs to the family of non-heme iron(II) and 2-oxoglutarate (2OG) dependent oxygenases, which have substantially conserved active sites and are proposed to employ a consensus mechanism proceeding via formation of an enzyme·Fe(II)·2OG·substrate ternary complex. Previously reported kinetic and crystallographic studies led to the proposal of an unusual "ping-pong" mechanism for DAOCS, which was significantly different from other members of the 2OG oxygenase superfamily. Here we report pre-steady-state kinetics and binding studies employing mass spectrometry and NMR on the DAOCS-catalyzed penN ring expansion that demonstrate the viability of ternary complex formation in DAOCS catalysis, arguing for the generality of the proposed consensus mechanism for 2OG oxygenases.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Catalysis
  • Crystallography, X-Ray
  • Intramolecular Transferases / chemistry*
  • Ketoglutaric Acids / chemistry*
  • Kinetics
  • Mass Spectrometry
  • Nuclear Magnetic Resonance, Biomolecular
  • Oxygenases / chemistry*
  • Penicillin-Binding Proteins / chemistry*

Substances

  • Ketoglutaric Acids
  • Penicillin-Binding Proteins
  • Oxygenases
  • Intramolecular Transferases
  • deacetoxycephalosporin C synthetase