Mining secreted proteins that function in pepper fruit development and ripening using a yeast secretion trap (YST)

Biochem Biophys Res Commun. 2014 Apr 18;446(4):882-8. doi: 10.1016/j.bbrc.2014.03.022. Epub 2014 Mar 13.

Abstract

Plant cells secrete diverse sets of constitutively- and conditionally-expressed proteins under various environmental and developmental states. Secreted protein populations, or secretomes have multiple functions, including defense responses, signaling, metabolic processes, and developmental regulation. To identify genes encoding secreted proteins that function in fruit development and ripening, a yeast secretion trap (YST) screen was employed using pepper (Capsicum annuum) fruit cDNAs. The YST screen revealed 80 pepper fruit-related genes (CaPFRs) encoding secreted proteins including cell wall proteins, several of which have not been previously described. Transient GFP-fusion assay and an in planta secretion trap were used to validate the secretion of proteins encoded by selected YST clones. In addition, RNA gel blot analyses provided further insights into their expression and regulation during fruit development and ripening. Integrating our data, we conclude that the YST provides a valuable functional genomics tool for the identification of substantial numbers of novel secreted plant proteins that are associated with biological processes, including fruit development and ripening.

Keywords: Capsicum; Fruit ripening; Secretome; Yeast secretion trap.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Capsicum / genetics
  • Capsicum / growth & development*
  • DNA, Complementary / genetics
  • Fruit / genetics
  • Fruit / growth & development*
  • Gene Expression Regulation, Developmental
  • Gene Expression Regulation, Plant*
  • Gene Library
  • Genes, Plant
  • Plant Proteins / genetics*
  • Plant Proteins / metabolism
  • Saccharomyces cerevisiae / genetics

Substances

  • DNA, Complementary
  • Plant Proteins