Reversion to susceptibility of a carbapenem-resistant clinical isolate of Klebsiella pneumoniae producing KPC-3

J Antimicrob Chemother. 2013 Nov;68(11):2482-6. doi: 10.1093/jac/dkt235. Epub 2013 Jun 25.

Abstract

Objectives: We report the case of a kidney-transplant patient, suffering an intra-abdominal abscess at the surgical site caused by a carbapenem-resistant ST258 Klebsiella pneumoniae clone, producing the KPC-3 carbapenemase. Under tigecycline treatment, the patient developed a sepsis caused by a carbapenem-susceptible ST258 K. pneumoniae strain. Complete DNA sequences of the plasmids carried by the resistant and susceptible strains from this patient were determined.

Methods: The complete DNA sequences of plasmids were obtained by applying the 454 Genome Sequencer FLX-PLUS procedure on a library constructed of total plasmid DNA purified from the carbapenem-resistant and -susceptible strains.

Results: In the carbapenem-resistant strain, four plasmids encoding 24 resistance genes, including blaKPC-3, and two putative virulence clusters were detected. In the susceptible strain, large rearrangements occurred in the KPC-carrying plasmid, causing the deletion of the entire Tn4401::blaKPC-3 transposon, with the consequent reversion of the strain to carbapenem susceptibility. The patient was successfully treated with carbapenems and fully recovered.

Conclusions: The description of the plasmid content in these two strains gives interesting insights into the plasticity of KPC-carrying plasmids in K. pneumoniae.

Keywords: plasmids; sequence type 258; transplant.

Publication types

  • Case Reports
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Abdominal Abscess / microbiology
  • Anti-Bacterial Agents / pharmacology*
  • Bacterial Proteins / metabolism*
  • Carbapenems / pharmacology*
  • DNA Transposable Elements
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • Genomic Instability
  • Humans
  • Kidney Transplantation
  • Klebsiella Infections / microbiology
  • Klebsiella pneumoniae / drug effects*
  • Klebsiella pneumoniae / enzymology
  • Klebsiella pneumoniae / genetics
  • Microbial Sensitivity Tests
  • Molecular Sequence Data
  • Plasmids / analysis
  • Sequence Analysis, DNA
  • Surgical Wound Infection / microbiology
  • Transplantation
  • beta-Lactam Resistance*
  • beta-Lactamases / metabolism*

Substances

  • Anti-Bacterial Agents
  • Bacterial Proteins
  • Carbapenems
  • DNA Transposable Elements
  • DNA, Bacterial
  • beta-Lactamases
  • carbapenemase

Associated data

  • GENBANK/JX442973
  • GENBANK/JX442974
  • GENBANK/JX442975
  • GENBANK/JX442976
  • GENBANK/JX442977