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Biochim Biophys Acta. 2013 Sep;1834(9):1824-31. doi: 10.1016/j.bbapap.2013.02.031. Epub 2013 Feb 28.

An engineered heme-copper center in myoglobin: CO migration and binding.

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  • 1Institute of Applied Physics and Center for Functional Nanostructures, Karlsruhe Institute of Technology, Karlsruhe, Germany.

Abstract

We have investigated CO migration and binding in CuBMb, a copper-binding myoglobin double mutant (L29H-F43H), by using Fourier transform infrared spectroscopy and flash photolysis over a wide temperature range. This mutant was originally engineered with the aim to mimic the catalytic site of heme-copper oxidases. Comparison of the wild-type protein Mb and CuBMb shows that the copper ion in the distal pocket gives rise to significant effects on ligand binding to the heme iron. In Mb and copper-free CuBMb, primary and secondary ligand docking sites are accessible upon photodissociation. In copper-bound CuBMb, ligands do not migrate to secondary docking sites but rather coordinate to the copper ion. Ligands entering the heme pocket from the outside normally would not be captured efficiently by the tight distal pocket housing the two additional large imidazole rings. Binding at the Cu ion, however, ensures efficient trapping in CuBMb. The Cu ion also restricts the motions of the His64 side chain, which is the entry/exit door for ligand movement into the active site, and this restriction results in enhanced geminate and slow bimolecular CO rebinding. These results support current mechanistic views of ligand binding in hemoglobins and the role of the CuB in the active of heme-copper oxidases. This article is part of a Special Issue entitled: Oxygen Binding and Sensing Proteins.

Copyright © 2013 Elsevier B.V. All rights reserved.

KEYWORDS:

Cu(B)Mb; FTIR; Fourier transform infrared; Fourier transform infrared spectroscopy; HCO; Heme protein; Ligand binding; Ligand migration; Mb; Photolysis difference spectroscopy; TDS; Temperature derivative spectroscopy; copper-binding Mb mutant L29H–F43H; heme–copper oxidase; myoglobin; temperature derivative spectroscopy

PMID:
23459127
[PubMed - indexed for MEDLINE]
PMCID:
PMC3687040
Free PMC Article
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