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Stand Genomic Sci. 2012 May 25;6(2):265-75. doi: 10.4056/sigs.2655905. Epub 2012 May 15.

Genome sequence of the ocean sediment bacterium Saccharomonospora marina type strain (XMU15(T)).

Abstract

Saccharomonospora marina Liu et al. 2010 is a member of the genus Saccharomonospora, in the family Pseudonocardiaceae that is poorly characterized at the genome level thus far. Members of the genus Saccharomonospora are of interest because they originate from diverse habitats, such as leaf litter, manure, compost, surface of peat, moist, over-heated grain, and ocean sediment, where they might play a role in the primary degradation of plant material by attacking hemicellulose. Organisms belonging to the genus are usually Gram-positive staining, non-acid fast, and classify among the actinomycetes. Here we describe the features of this organism, together with the complete genome sequence (permanent draft status), and annotation. The 5,965,593 bp long chromosome with its 5,727 protein-coding and 57 RNA genes was sequenced as part of the DOE funded Community Sequencing Program (CSP) 2010 at the Joint Genome Institute (JGI).

KEYWORDS:

CSP 2010; Gram-positive; Pseudonocardiaceae; aerobic; chemoheterotrophic; marine bacterium; non-motile; spore-forming; vegetative and aerial mycelia

PMID:
22768369
[PubMed]
PMCID:
PMC3387791
Free PMC Article
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