Identification of four novel alleles of the BoLA-DRB3 upstream regulatory region in Chinese yellow cattle

Tissue Antigens. 2012 Jul;80(1):58-60. doi: 10.1111/j.1399-0039.2012.01871.x. Epub 2012 Apr 8.

Abstract

The sequence of upstream regulatory region (URR) of BoLA-DRB3 gene was amplified with polymerase chain reaction followed by DNA sequencing from six animals of Chinese yellow cattle. A total of five alleles including four newly identified ones, named BoLA-DRB3*R-03-U2, BoLA-DRB3*R-06-U2, BoLA-DRB3*R-07-U and BoLA-DRB3*R-12-U for the BoLA-DRB3 URR were found. Result of sequence analysis showed that the regulatory elements W, X, Y, CCAAT and TATA-like boxes existed in such URRs and 16 polymorphic sites (11 transitions, 3 transversions, 1 deletion and 1 insertion) located in the spacers between the conserved consensus boxes and 1 insertion within X box, while no new polymorphic site within the consensus boxes.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alleles
  • Animals
  • Cattle / immunology
  • China
  • Cloning, Molecular
  • Histocompatibility Antigens Class II / genetics*
  • Histocompatibility Testing
  • Mutation / genetics*
  • Polymerase Chain Reaction
  • Regulatory Sequences, Nucleic Acid / genetics*
  • Sequence Alignment

Substances

  • BoLA-DRB3 antigen
  • Histocompatibility Antigens Class II