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Methods Mol Biol. 2012;804:343-73. doi: 10.1007/978-1-61779-361-5_19.

Analyzing biological data using R: methods for graphs and networks.

Author information

  • 1IRISA, Equipe Symbiose, Universit√© de Rennes I, Rennes, France. nlemeur@gmail.com

Abstract

R is a powerful language and widely used software tool for the analysis and visualization of data. Its core capabilities can be extended through many different add-on packages. Among the many packages are some which offer a broad range of facilities for analyzing statistical properties of graphs. This chapter provides a practical tutorial covering the use of R methods for graphs and networks to examine biological data and analyze their topological and statistical properties.

PMID:
22144163
[PubMed - indexed for MEDLINE]
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