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    Results: 1 to 20 of 53

    1.

    Evolutionary histories of expanded peptidase families in Schistosoma mansoni.

    Silva LL, Marcet-Houben M, Zerlotini A, Gabaldón T, Oliveira G, Nahum LA.

    Mem Inst Oswaldo Cruz. 2011 Nov;106(7):864-77.

    PMID:
    22124560
    [PubMed - in process]
    Free Article
    2.

    Evidence for short-time divergence and long-time conservation of tissue-specific expression after gene duplication.

    Huerta-Cepas J, Dopazo J, Huynen MA, Gabaldón T.

    Brief Bioinform. 2011 Sep;12(5):442-8. Epub 2011 Apr 22.

    PMID:
    21515902
    [PubMed - indexed for MEDLINE]
    3.

    CycADS: an annotation database system to ease the development and update of BioCyc databases.

    Vellozo AF, Véron AS, Baa-Puyoulet P, Huerta-Cepas J, Cottret L, Febvay G, Calevro F, Rahbé Y, Douglas AE, Gabaldón T, Sagot MF, Charles H, Colella S.

    Database (Oxford). 2011 Apr 7;2011:bar008. Print 2011.

    PMID:
    21474551
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    4.

    Phylemon 2.0: a suite of web-tools for molecular evolution, phylogenetics, phylogenomics and hypotheses testing.

    Sánchez R, Serra F, Tárraga J, Medina I, Carbonell J, Pulido L, de María A, Capella-Gutíerrez S, Huerta-Cepas J, Gabaldón T, Dopazo J, Dopazo H.

    Nucleic Acids Res. 2011 Jul;39(Web Server issue):W470-4. Epub 2011 Jun 6.

    PMID:
    21646336
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    5.

    A midzone-based ruler adjusts chromosome compaction to anaphase spindle length.

    Neurohr G, Naegeli A, Titos I, Theler D, Greber B, Díez J, Gabaldón T, Mendoza M, Barral Y.

    Science. 2011 Apr 22;332(6028):465-8. Epub 2011 Mar 10.

    PMID:
    21393511
    [PubMed - indexed for MEDLINE]
    Free Article
    6.

    Assigning duplication events to relative temporal scales in genome-wide studies.

    Huerta-Cepas J, Gabaldón T.

    Bioinformatics. 2011 Jan 1;27(1):38-45. Epub 2010 Nov 11.

    PMID:
    21075746
    [PubMed - indexed for MEDLINE]
    Free Article
    7.

    PhylomeDB v3.0: an expanding repository of genome-wide collections of trees, alignments and phylogeny-based orthology and paralogy predictions.

    Huerta-Cepas J, Capella-Gutierrez S, Pryszcz LP, Denisov I, Kormes D, Marcet-Houben M, Gabaldón T.

    Nucleic Acids Res. 2011 Jan;39(Database issue):D556-60. Epub 2010 Nov 12.

    PMID:
    21075798
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    8.

    Regulation of Candida glabrata oxidative stress resistance is adapted to host environment.

    Roetzer A, Klopf E, Gratz N, Marcet-Houben M, Hiller E, Rupp S, Gabaldón T, Kovarik P, Schüller C.

    FEBS Lett. 2011 Jan 21;585(2):319-27. Epub 2010 Dec 13.

    PMID:
    21156173
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    9.

    MetaPhOrs: orthology and paralogy predictions from multiple phylogenetic evidence using a consistency-based confidence score.

    Pryszcz LP, Huerta-Cepas J, Gabaldón T.

    Nucleic Acids Res. 2011 Mar;39(5):e32. Epub 2010 Dec 11.

    PMID:
    21149260
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    10.

    TreeKO: a duplication-aware algorithm for the comparison of phylogenetic trees.

    Marcet-Houben M, Gabaldón T.

    Nucleic Acids Res. 2011 May;39(10):e66. Epub 2011 Feb 18.

    PMID:
    21335609
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    11.

    Predicting phenotypic traits of prokaryotes from protein domain frequencies.

    Lingner T, Mühlhausen S, Gabaldón T, Notredame C, Meinicke P.

    BMC Bioinformatics. 2010 Sep 24;11:481.

    PMID:
    20868492
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    12.

    YibK is the 2'-O-methyltransferase TrmL that modifies the wobble nucleotide in Escherichia coli tRNA(Leu) isoacceptors.

    Benítez-Páez A, Villarroya M, Douthwaite S, Gabaldón T, Armengod ME.

    RNA. 2010 Nov;16(11):2131-43. Epub 2010 Sep 20.

    PMID:
    20855540
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    13.

    Predicting phenotypic traits of prokaryotes from protein domain frequencies.

    Lingner T, Mühlhausen S, Gabaldón T, Notredame C, Meinicke P.

    BMC Bioinformatics. 2010 Sep 24;11:481.

    PMID:
    20868492
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    14.

    From Saccharomyces cerevisiae to Candida glabratain a few easy steps: important adaptations for an opportunistic pathogen.

    Roetzer A, Gabaldón T, Schüller C.

    FEMS Microbiol Lett. 2011 Jan;314(1):1-9. doi: 10.1111/j.1574-6968.2010.02102.x. Epub 2010 Sep 16. Review.

    PMID:
    20846362
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    15.

    Impact of the mitochondrial genetic background in complex III deficiency.

    Gil Borlado MC, Moreno Lastres D, Gonzalez Hoyuela M, Moran M, Blazquez A, Pello R, Marin Buera L, Gabaldon T, Garcia Peñas JJ, Martín MA, Arenas J, Ugalde C.

    PLoS One. 2010 Sep 17;5(9). pii: e12801.

    PMID:
    20862300
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    16.

    Lack of phylogenetic support for a supposed actinobacterial origin of peroxisomes.

    Gabaldón T, Capella-Gutiérrez S.

    Gene. 2010 Oct 1;465(1-2):61-5. Epub 2010 Jun 25.

    PMID:
    20600706
    [PubMed - indexed for MEDLINE]
    17.

    The pea aphid phylome: a complete catalogue of evolutionary histories and arthropod orthology and paralogy relationships for Acyrthosiphon pisum genes.

    Huerta-Cepas J, Marcet-Houben M, Pignatelli M, Moya A, Gabaldón T.

    Insect Mol Biol. 2010 Mar;19 Suppl 2:13-21.

    PMID:
    20482636
    [PubMed - indexed for MEDLINE]
    18.

    TACC3-TSC2 maintains nuclear envelope structure and controls cell division.

    Gómez-Baldó L, Schmidt S, Maxwell CA, Bonifaci N, Gabaldón T, Vidalain PO, Senapedis W, Kletke A, Rosing M, Barnekow A, Rottapel R, Capellá G, Vidal M, Astrinidis A, Piekorz RP, Pujana MA.

    Cell Cycle. 2010 Mar 15;9(6):1143-55. Epub 2010 Mar 15.

    PMID:
    20237422
    [PubMed - indexed for MEDLINE]
    Free Article
    19.

    DeathBase: a database on structure, evolution and function of proteins involved in apoptosis and other forms of cell death.

    Díez J, Walter D, Muñoz-Pinedo C, Gabaldón T.

    Cell Death Differ. 2010 May;17(5):735-6. No abstract available.

    PMID:
    20383157
    [PubMed - indexed for MEDLINE]
    Free Article
    20.

    Immunity and other defenses in pea aphids, Acyrthosiphon pisum.

    Gerardo NM, Altincicek B, Anselme C, Atamian H, Barribeau SM, de Vos M, Duncan EJ, Evans JD, Gabaldón T, Ghanim M, Heddi A, Kaloshian I, Latorre A, Moya A, Nakabachi A, Parker BJ, Pérez-Brocal V, Pignatelli M, Rahbé Y, Ramsey JS, Spragg CJ, Tamames J, Tamarit D, Tamborindeguy C, Vincent-Monegat C, Vilcinskas A.

    Genome Biol. 2010;11(2):R21. Epub 2010 Feb 23.

    PMID:
    20178569
    [PubMed - indexed for MEDLINE]
    Free PMC Article

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