Infect Genet Evol. 2012 Jun;12(4):877-82. doi: 10.1016/j.meegid.2011.10.008. Epub 2011 Oct 19.
A database for animal tuberculosis (mycoDB.es) within the context of the Spanish national programme for eradication of bovine tuberculosis.
Rodriguez-Campos S,
González S,
de Juan L,
Romero B,
Bezos J,
Casal C,
Álvarez J,
Fernández-de-Mera IG,
Castellanos E,
Mateos A,
Sáez-Llorente JL,
Domínguez L,
Aranaz A;
Spanish Network on Surveillance Monitoring of Animal Tuberculosis.
Garrido F, Fornell C, Gómez JM, Jiménez A, Muñoz I, Téllez JA, Villalba EJ, Abacens N, Belanche I, Gracia J, Izquierdo S, Malo JM, Copano MF, Fernández E, Merediz I, Peláez P, Pieltain C, Vigo V, Fernández C, Fernández FM, Gradillas MG, Gutiérrez M, Sola E, Alcaide V, Alia J, Alonso J, Bermúdez MR, Fernández C, García P, Grande E, Plaza F, Rando ML, Rojas C, Sánchez A, Viñuelas JA, Anguiano JA, Burón I, Cermeño J, Domínguez C, Fernández F, Grau A, Marques S, Martín O, Martínez C, Mínguez O, Moreno F, Reviriego F, Romero I, Gou J, Puy JR, Dorado E, Sanz C, Calvo C, Fernández D, Mourelo JE, Aguilo C, Portau MJ, Vidal C, Cámara JM, Carpintero J, Delso C, Díaz R, Fernández E, Fernández-Zapata C, García M, Pages E, Urquía JJ, Pastor J, Rivas C, Eguiluz J, Eslava F, Fernández C, Puértolas FJ, Soldevilla JF, Caballero C, Lázaro M, Jacoste A, Moreno M, Lavin S, Mentaberre G, García-Bocanegra I, Perea A, García A, Hermoso de Mendoza J, Parra A, Rodríguez-Ferri EF, González-Llamazares O, Blanco J, Castaño M, Díez-Guerrier AA, González JV, Mazzucchelli F, Novoa C, Pickering X, Pizarro M, Santurde G, Simarro I, Contreras A, Sánchez J, Fernández A, Quesada O, Latre MV, Domingo M, Pérez B, López S, Vidal D, Garrido J, Juste R, Galka M, Sánchez C, de la Fuente J, Gortázar C, Vicente J, Espí A, Prieto JM, Balseiro A, Carpio I, Domínguez AJ, Fernández M, Rubio JM, García M, Guedeja J, Osuna F, del Pozo JL, Gómez-Mampaso MD, Borrás R, Díez de Tejada P, Fernández JM, Gil C, Moneo-López F, Larrauri I, Cermeño J, Martín D, García JL, Rodríguez A, Sainz E, Mora PJ, Amigo JM, Castro N, Collado V, Cumbreño JL, Finat JM, Herranz MP, Legaz E, Portas LM, Rodríguez J, Sánchez L, Sebastián JM, Yuste T, Santos A, Fonbellida J, Rodríguez J.
Source
Centro de Vigilancia Sanitaria Veterinaria (VISAVET), Universidad Complutense de Madrid, 28040 Madrid, Spain.
Abstract
Spoligotyping and mycobacterial interspersed repetitive unit-variable number tandem repeat (MIRU-VNTR) analysis are the international standard techniques for molecular typing of members of the Mycobacterium tuberculosis complex. To enable the exploitation of molecular typing data for epidemiological purposes, the creation of large databases is indispensable. Here we describe mycoDB.es, a database for animal tuberculosis which forms part of the Spanish national programme for eradication of bovine tuberculosis. This database has been created as an epidemiological tool at national level and contains spoligotype patterns of 17,273 isolates clustered in 401 different spoligotypes of Mycobacterium bovis, Mycobacterium caprae and M. tuberculosis. The database offers an overview of the present spoligotypes, to a lower extent also of MIRU-VNTR types, affected animal species and furthermore of the spatial distribution of these genotypes.
Copyright © 2011 Elsevier B.V. All rights reserved.
- PMID:
- 22027158
- [PubMed - indexed for MEDLINE]
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