TLX-dependent signaling in postnatal NSCs. A, Whole-genome expression was examined by sequencing of the RNAs isolated from sorted Nes-GFP+ cells from 3-week-old wild-type or Tlx-null brains. Representative genes for 4 categories: no expression (Myod1), no change on expression (Nes, Sox2, and Blbp), up-regulated (p21) and down-regulated (Ccnd2). RPKM, reads per kilobase of exon model per million mapped reads. B, KEGG pathway analysis. Please note the significant changes on genes involved in cancer/glioma, cell cycle, Wnt signaling, DNA replication and p53 signaling. C, D, Expression changes on genes in DNA replication. C, Sequencing data. D, Heatmap representation of fold changes on gene expression, which was determined by sequencing or qRT-PCR analysis of RNA from Tlx-null NSCs. Data from microarray analysis of adult NSCs after inducible deletion of Tlx (Zhang et al., 2008) was also included. E, Inducible deletion of Tlx leads to inactive stem cells. Tlx+/LacZ adult NSCs with a CreERTM transgene and/or a floxed allele of Tlx (FCZ and CZ, respectively) were treated with 4-hydroxytamoxifen (TM) or vehicle (ethanol). Genomic DNA was isolated and measured at the indicated time points after treatment (n = 3. *p = 0.02 and **p = 0.001).