(a) A summary diagram showing that prothrombin binding is limited to the NH2-terminal SC domains (D1-D2) contained in the SC(1-325) fragment, while SC COOH-terminal repeats bind multiple fibrin(ogen) D domains. (b) Fluorescence (top) and white light (bottom) images of the native gels for the following samples: SC(1-325) (lane 1), fluorescent labeled prothrombin (lane 2), fragment D (FragD) (lane 3), labeled prothrombin with 1.1-fold SC(1-325) (lane 4), labeled prothrombin with 1.1-fold SC(1-325) and 8-fold molar excess FragD (lane 5), labeled prothrombin and FragD (lane 6). (c) Similar lanes using full-length SC (SC(1-660)) demonstrate the formation of a SC(1-660)•prothrombin•FragD ternary complex (lane 5). (d) Native gel electrophoresis demonstrating that SC binds multiple FragD domains through COOH-terminal repeats on SC. Mixtures of SC(1-660) with increasing molar ratios of FragD are shown in lanes 2-9 (1, 2, 4, 5, 6, 7, 8 and 10-fold molar excess of FragD); samples of SC(1-660) and FragD alone were run in lanes 1 and 10, respectively. (e) Binding of fragment D to fluorescein-labeled SC pseudorepeat-repeat-1. Titrations of the relative increase in fluorescence (ΔF/Fo) of a 5-(iodoacetamido)fluorescein-labeled Cys residue attached to the COOH-terminus of the SC pseudorepeat-repeat-1 peptide at 20 (filled circle), 430 (open circle), and 855 nM (filled triangle) as a function of the total concentration of fragment D ([FragD]o). Solid lines represent the simultaneous least-squares fit of the quadratic binding equation with KD 36 ± 8 nM, stoichiometric factor 0.77 ± 0.06 mol of fragment D/mol of peptide, and a maximum fluorescence change of 8.7 ± 0.2 %. Inset: SDS-PAGE of molecular mass standards in kDa (lane 1), protein-stained gel (4 μg, lane 2), and fluorescence of the same gel (lane 3).