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Bioinformatics. 2011 Jun 15;27(12):1739-40. doi: 10.1093/bioinformatics/btr260. Epub 2011 May 5.

Molecular signatures database (MSigDB) 3.0.

Author information

  • 1Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.

Abstract

MOTIVATION:

Well-annotated gene sets representing the universe of the biological processes are critical for meaningful and insightful interpretation of large-scale genomic data. The Molecular Signatures Database (MSigDB) is one of the most widely used repositories of such sets.

RESULTS:

We report the availability of a new version of the database, MSigDB 3.0, with over 6700 gene sets, a complete revision of the collection of canonical pathways and experimental signatures from publications, enhanced annotations and upgrades to the web site.

AVAILABILITY AND IMPLEMENTATION:

MSigDB is freely available for non-commercial use at http://www.broadinstitute.org/msigdb.

PMID:
21546393
[PubMed - indexed for MEDLINE]
PMCID:
PMC3106198
Free PMC Article
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