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    Nucleic Acids Res. 2011 Jan;39(Database issue):D620-4. Epub 2010 Nov 17.

    dictyBase update 2011: web 2.0 functionality and the initial steps towards a genome portal for the Amoebozoa.

    Gaudet P, Fey P, Basu S, Bushmanova YA, Dodson R, Sheppard KA, Just EM, Kibbe WA, Chisholm RL.

    Source

    dictyBase, Northwestern University Biomedical Informatics Center and Center for Genetic Medicine, 420 E Superior St, Chicago, IL 60611, USA.

    Abstract

    dictyBase (http://www.dictybase.org), the model organism database for Dictyostelium, aims to provide the broad biomedical research community with well integrated, high quality data and tools for Dictyostelium discoideum and related species. dictyBase houses the complete genome sequence, ESTs, and the entire body of literature relevant to Dictyostelium. This information is curated to provide accurate gene models and functional annotations, with the goal of fully annotating the genome to provide a 'reference genome' in the Amoebozoa clade. We highlight several new features in the present update: (i) new annotations; (ii) improved interface with web 2.0 functionality; (iii) the initial steps towards a genome portal for the Amoebozoa; (iv) ortholog display; and (v) the complete integration of the Dicty Stock Center with dictyBase.

    PMID:
    21087999
    [PubMed - indexed for MEDLINE]
    PMCID:
    PMC3013695
    Free PMC Article

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        Dimmer EC, Huntley RP, Alam-Faruque Y, Sawford T, O'Donovan C, Martin MJ, Bely B, Browne P, Mun Chan W, Eberhardt R, et al. Nucleic Acids Res. 2012 Jan; 40(Database issue):D565-70. Epub 2011 Nov 28.
      • Ensembl Genomes: an integrative resource for genome-scale data from non-vertebrate species. [Nucleic Acids Res. 2012]
        Ensembl Genomes: an integrative resource for genome-scale data from non-vertebrate species.
        Kersey PJ, Staines DM, Lawson D, Kulesha E, Derwent P, Humphrey JC, Hughes DS, Keenan S, Kerhornou A, Koscielny G, et al. Nucleic Acids Res. 2012 Jan; 40(Database issue):D91-7. Epub 2011 Nov 8.

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