Mitochondrial dysfunction in aging. (A) COX/succinate dehydrogenase (SDH) double labeling to visualize respiratory chain deficiencies, indicated by blue staining, in brains of 9- to 46-wk-old male and female mtDNA mutator (n = 24; red) and 9- to 130-wk-old littermate wild-type (n = 30; black) mice. (Scale bar: 1.00 mm.) (B) Semiquantification (mean values ± SEM) of COX deficiency on a scale of 0–4 (0, no blue staining; 4, only blue staining; recorded blindly) shows that mitochondrial respiratory chain dysfunction begins at 9–12 wk in mtDNA mutator mice and becomes widespread in cerebral cortex [H(4) = 11.7; P = 0.008], hippocampus [H(4) = 11.8; P = 0.008], nucleus accumbens [H(4) = 9.59; P = 0.022], striatum [H(4) = 10.4; P = 0.016], and thalamus [H(4) = 9.87; P = 0.019] as these mice age. In wild-type mice, there was increased COX deficiency in similar brain regions, indicating respiratory chain dysfunction in normal aging: cerebral cortex [H(5) = 21.7; P = 0.0002], hippocampus [H(5) = 18.4; P = 0.001], nucleus accumbens [H(5) = 21.4; P = 0.0003], striatum [H(5) = 18.3; P = 0.001], and thalamus [H(5) = 17.1; P = 0.019]. In wild-type mice, there was also increased COX deficiency in hippocampus [H(4) = 8.36; P = 0.039] and striatum [H(4) = 9.10; P = 0.028] over time from the 9- to 12-wk group to the 42- to 46-wk group. Observations were made at all time points, and short lines indicate 0 ratings (no blue staining). Significances from nonparametric data were determined by one-way Kruskal–Wallis ANOVA denoted with *P < 0.05, **P < 0.01, and ***P < 0.001.