Comprehensive mapping of the human kinome to epidermal growth factor receptor signaling

J Biol Chem. 2010 Jul 2;285(27):21134-42. doi: 10.1074/jbc.M110.137828. Epub 2010 Apr 26.

Abstract

Disregulation of epidermal growth factor receptor (EGFR) signaling directly promotes bypass of proliferation and survival restraints in a high frequency of epithelia-derived cancer. As such, much effort is currently focused on decoding the molecular architecture supporting EGFR activation and function. Here, we have leveraged high throughput reverse phase protein lysate arrays, with a sensitive fluorescent nanocrystal-based phosphoprotein detection assay, together with large scale siRNA-mediated loss of function to execute a quantitative interrogation of all elements of the human kinome supporting EGF-dependent signaling. This screening platform has captured multiple novel contributions of diverse protein kinases to modulation of EGFR signal generation, signal amplitude, and signal duration. As examples, the prometastatic SNF1/AMPK-related kinase hormonally upregulated Neu kinase was found to support EGFR activation in response to ligand binding, whereas the enigmatic kinase MGC16169 selectively supports coupling of active EGFR to ERK1/2 regulation. Of note, the receptor tyrosine kinase MERTK and the pyrimidine kinase UCK1 were both found to be required for surface accumulation of EGFR and subsequent pathway activation in multiple cancer cell backgrounds and may represent new targets for therapeutic intervention.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell Line
  • Chromosome Mapping / methods*
  • Cues
  • Enzyme Activation / drug effects
  • Epidermal Growth Factor / pharmacology
  • ErbB Receptors / genetics*
  • ErbB Receptors / physiology
  • Humans
  • Microclimate
  • Mitogen-Activated Protein Kinase 3 / metabolism
  • Nucleic Acid Hybridization
  • Proto-Oncogene Proteins / metabolism
  • RNA Interference
  • RNA, Small Interfering / genetics
  • Receptor Protein-Tyrosine Kinases / metabolism
  • STAT3 Transcription Factor / metabolism
  • Signal Transduction
  • c-Mer Tyrosine Kinase

Substances

  • Proto-Oncogene Proteins
  • RNA, Small Interfering
  • STAT3 Transcription Factor
  • STAT3 protein, human
  • Epidermal Growth Factor
  • ErbB Receptors
  • MERTK protein, human
  • Receptor Protein-Tyrosine Kinases
  • c-Mer Tyrosine Kinase
  • Mitogen-Activated Protein Kinase 3